User:Kenny

Space-efficient method to browse coexpression clusters.

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Image of metaclusters with two examples exploded to promoter level.

INSTRUCTIONS FOR BROWSING DATA

1. Download Biolayout here: http://www.biolayout.org/download/

2. Download and extract the summary file:

https://fantom5-collaboration.gsc.riken.jp/wiki/index.php/File:Sized_SYNC015_2_p90_m22_Tmetaclusters3.zip

and all the individual cluster files:

https://fantom5-collaboration.gsc.riken.jp/wiki/index.php/File:Coexpression_clusters1.tar.gz

3. Open two Biolayout windows.

4. In one window, open "sized_SYNC015_2_p90_m22_Tmetaclusters3.layout". Hover over a node to see which cluster it represents

5. In the other window, open the corresponding .expression file.

Ultimately this system coudl easily be integrated into a webstart version of bioloayout, in which ctrl-clicking on on node automatically opens the corersponding cluster file.