Olfactory transduction pathway

From Wiki
Jump to navigationJump to search


Purpose

This page is to facilitate the work on olfactory receptors. In particular, it will contain the material necessary to check in a library if the olfactory signal transduction pathway is expressed or not.

Cross-references

  • Kegg pathway map04740, Olfactory transduction
 (curl ftp://ftp.genome.jp/pub/kegg/pathway/ko/ko.list | grep path:ko04740)
path:ko04740	ko:K04257	ko:OLFR
path:ko04740	ko:K04345	ko:PKA ec:2.7.11.11
path:ko04740	ko:K04515	ko:CAMK2 ec:2.7.11.17
path:ko04740	ko:K04633	ko:GNAL
path:ko04740	ko:K04950	ko:CNGA3
path:ko04740	ko:K04951	ko:CNGA4
path:ko04740	ko:K04952	ko:CNGB1
path:ko04740	ko:K05027	ko:CLCA1
path:ko04740	ko:K05028	ko:CLCA2
path:ko04740	ko:K05029	ko:CLCA3
path:ko04740	ko:K05030	ko:CLCA4
path:ko04740	ko:K07376	ko:PRKG ec:2.7.11.12
path:ko04740	ko:K08043	ko:ADCY3 ec:4.6.1.1
path:ko04740	ko:K08327	ko:PDC
path:ko04740	ko:K08328	ko:GUCA1
path:ko04740	cpd:C00076	
path:ko04740	cpd:C00575	
path:ko04740	cpd:C00698	
path:ko04740	cpd:C00942	
path:ko04740	cpd:C01330	
  • Gene ontology GO:0007608, sensory perception of smell

Gene list

PKA, CAMK2, GNAL, CNGA3, CNGA4, CNGB1, CLCA1, CLCA2, CLCA3, CLCA4, PRKG, ADCY3, PDC, GUCA1.

Actually, this is a list of gene families. Here is for instance PKA:

HSA: 	5566(PRKACA) 5567(PRKACB) 5568(PRKACG) 5613(PRKX)
MMU: 	18747(Prkaca) 18749(Prkacb) 19108(Prkx)
RNO: 	25636(Prkaca) 293508(Prkacb) 501563(Prkx)
CFA: 	403556(PRKACA) 479975(PRKACB) 610031(PRKX)

more curation may be needed…