Mast cell

Primary mast cells

Human mast cells were provided by Magda Babina and Sven Guhl.

Zenbu configurations and status

• [1]

Ranked Biomarkers based on gene expression profiles

• Top specific TFs in Mast cells, based on simple fold change, entropy, mogrify, timo_method

Ranked list of motifs

• HOMER results from Rehli lab
• KAUST group
• VIGG group
• MARA group

MARA based network results

• Mast cell core network based on top 30 specific motifs
• Mast cell extended network based on top 30 specific motifs plus gene ontology enrichments of predicted targets

Related samples

• many other blood cells....

References

• First paper on ...: http://www.ncbi.nlm.nih.gov/pubmed/78

Quality control

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