Data submission: Difference between revisions
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| Helicos CAGE |
| Helicos CAGE |
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Revision as of 09:49, 1 August 2013
Phase 1 data
| DRA accession number | data set | library type | library IDs |
|---|---|---|---|
| DRA000991 | Phase1 all FREEZE 1.1 data (Phase 1 main paper set) | Helicos CAGE | 1383 libraries in https://fantom5-collaboration.gsc.riken.jp/files/data/shared/FREEZE_PHASE1.1/ |
| DRA001026 | Phase1 additional set 1 (non FREEZE1.1 mast cell 4 samples) | Helicos CAGE | CNhs13924, CNhs13925, CNhs13926, CNhs13927 (in FREEZE2) |
| DRA001027 | Phase1 additional set 2 (non FREEZE1.1 T-reg human 4 samples) | Helicos CAGE | CNhs13918, CNhs13919, CNhs13920, CNhs13921 (in FREEZE2) |
| DRA001028 | Phase1 additional set 3 (non FREEZE1.1 T-reg mouse 5 samples) | Helicos CAGE | CNhs13913, CNhs14142, CNhs14158, CNhs14159, CNhs14160 (in FREEZE2) |
| (in preparation) | Phase1 additional set 4 (non FREEZE1.1 enhancer paper samples) | Illumina RNA-Seq | RDhi10000-RDhi10005, RDhi10007-RDhi10012, RDhi10014-RDhi10019 |
| Illumina small RNA-Seq | SRhi10066 (tag: TAGCTT, GGCTAC, CTTGTA), SRhi10010 (tag: TTAGGC, CTTGTA, GTGAAA) |
Others
| DRA accession number | data set | library type | library IDs |
|---|---|---|---|
| DRA001100 | Platform comparison | Helicos CAGE | CNhs10325-CNhs10356 |
| Illumina CAGE | J20-DA (tag:ACA,ACG,ACT,AGC,ATC,ATG), J21-DA (tag:ACA,ACG,ACT,ATC,ATG), J48-DA (tag:ACA,ACG,ACT,ATC,ATG), J49-DA (tag:ACA,ACG,ACT,ATC,ATG) | ||
| Illumina RNA-Seq | RNig10094-RNig10098, RNig10100-RNig10106 |
