Time-courses resources: Difference between revisions
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* time-points with poor QC removed (Erik Arner's QC) |
* time-points with poor QC removed (Erik Arner's QC) |
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*RLE normalized |
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*for each tag cluster (TC) |
*for each tag cluster (TC) |
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*for all time courses (phase 2) |
*for all time courses (phase 2) |
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*expression |
*expression |
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*time-points with poor QC removed (Erik Arner's QC) |
*time-points with poor QC removed (Erik Arner's QC) |
||
* |
*RLE normalized |
||
*for each tag cluster (TC) |
*for each tag cluster (TC) |
||
*for all snap-shots (phase 1) AND time courses (phase 2) |
*for all snap-shots (phase 1) AND time courses (phase 2) |
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*expression |
*expression |
||
*time-points with poor QC removed (Erik Arner's QC) |
*time-points with poor QC removed (Erik Arner's QC) |
||
* |
*RLE normalized |
||
*for each tag cluster (TC) |
*for each tag cluster (TC) |
||
*for all snap-shots (phase 1) AND time courses (phase 2) - what makes most sense??? |
*for all snap-shots (phase 1) AND time courses (phase 2) - what makes most sense??? |
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*expression |
*expression |
||
*time-points with poor QC removed (Erik Arner's QC) |
*time-points with poor QC removed (Erik Arner's QC) |
||
* |
*RLE normalized |
||
*for each tag cluster (TC) |
*for each tag cluster (TC) |
||
*for all snap-shots (phase 1) AND time courses (phase 2) |
*for all snap-shots (phase 1) AND time courses (phase 2) |
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Revision as of 01:21, 31 January 2013
Links to data
List of time-course
- list of the time-courses in text format
Expression table 1
- expression
- time-points with poor QC removed (Erik Arner's QC)
- RLE normalized
- for each tag cluster (TC)
- for all time courses (phase 2)
(put link here)
Expression table 2
- expression
- time-points with poor QC removed (Erik Arner's QC)
- RLE normalized
- for each tag cluster (TC)
- for all snap-shots (phase 1) AND time courses (phase 2)
(put link here)
TF expression table 2
- expression
- time-points with poor QC removed (Erik Arner's QC)
- RLE normalized
- for each tag cluster (TC)
- for all snap-shots (phase 1) AND time courses (phase 2) - what makes most sense???
(put link here)
Enhancer expression table
- expression
- time-points with poor QC removed (Erik Arner's QC)
- RLE normalized
- for each tag cluster (TC)
- for all snap-shots (phase 1) AND time courses (phase 2)
(put link here)
Links to gene tables
List of key marker genes for each of the time-courses
- extract from individual time-course pages
- will be used to check each of the time-courses
List of transcription factors
- link to existing list
