HSC development: Difference between revisions
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*Promoterome v1.0 expression for the HSC development series |
*Promoterome v1.0 expression for the HSC development series |
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*Top dynamic TFs in the HSC development series |
*Top dynamic TFs in the HSC development series |
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*Freeze1 cluster based RLE normalized expression |
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** https://fantom5-collaboration.gsc.riken.jp/webdav/home/m.lizio/20120612_cluster_expression_table_by_timecourse/mouse_hematopoietic_stem_cell.hCAGE.mm9.RLE.tpm.cluster.txt.gz |
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** Cluster to gene association https://fantom5-collaboration.gsc.riken.jp/webdav/home/m.lizio/20120612_cluster_expression_table_by_timecourse/mouse_cluster2entrez.txt |
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'''Motifs''' |
'''Motifs''' |
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Revision as of 11:16, 13 June 2012
...
Zenbu configurations and status
Gene expression profiles
- Known gene expression for the HSC development series
- TPM
- tagcount
- Promoterome v1.0 expression for the HSC development series
- Top dynamic TFs in the HSC development series
- Freeze1 cluster based RLE normalized expression
- https://fantom5-collaboration.gsc.riken.jp/webdav/home/m.lizio/20120612_cluster_expression_table_by_timecourse/mouse_hematopoietic_stem_cell.hCAGE.mm9.RLE.tpm.cluster.txt.gz
- Cluster to gene association https://fantom5-collaboration.gsc.riken.jp/webdav/home/m.lizio/20120612_cluster_expression_table_by_timecourse/mouse_cluster2entrez.txt
Motifs
- Top dynamic motifs in the HSC development series
MARA based network results
- HSC development network based on top 30 dynamic motifs
Related samples
- ...
References
- ...
Quality control
- ...
