Time-courses analysis call

Weekly telephone calls open to all collaborators are held every Tuesday 17:00 -18:00 JST. In case of Japanese holidays or special events, no call will be held. In such cases, information will be sent out to the FANTOM5 mailing list.

The agenda is decided by the FANTOM5 Management group at RIKEN. Suggestions can be sent to Carsten Daub. Agenda will be announced to the FANTOM5 mailing list every Monday. Agenda and presentation materials will be available on this page before each meeting.

The meetings will be recorded and saved here for later reference.

Phone numbers:

From outside of Japan: +81-3-4333-4000

From anywhere in Japan: 050-3786-6666 (in Japanese) or 0570-03-4444 (in English)

From the Tokyo Area: 03-4333-4444 (in Japanese) or 03-4333-4000 (in English)

From the Osaka Area: 06-7637-2222

You will be asked to enter conference ID followed by # and guest password followed by # to join the conference. Please find them below:

Conference id: 24711

Guest password: 3502

You will also be asked to state your name and press the # key.

TIPS ON USAGE:

We recommend putting your line in "listen-only" mode during presentation sessions of the call to avoid noise and other interferences.

To enable "listen-only" mode press 97.

To disable "listen-only" mode press 96.

Call In Instructions for guest users (English)

Call In Instructions for guest users (Japanese)

October 2nd

Chair: Carsten Daub

AGENDA

1. Topic 1 File:TopicX.pdf

2. Topic 2 File:TopicY.pdf

3. Other topics, if any

Analysis Call Tip:

If concerned about the noise, we recommend putting your line in "listen-only" mode during presentation sessions of the call.

To enable "listen-only" mode press 97.

To disable "listen-only" mode press 96.

Audio File The audio file from the call on October 2nd (uploaded after the call): File:121002 F5 Time-course telecon.zip

September 25th

Chair: Carsten Daub

AGENDA

1. Presentation "Robust identification of expression level switching and measures of regulatory complexity in timecourse data" by Martin Taylor File:Topic1.pdf

2. Topic 2 File:Topic2.pdf

3. Other topics, if any

Analysis Call Tip:

If concerned about the noise, we recommend putting your line in "listen-only" mode during presentation sessions of the call.

To enable "listen-only" mode press 97.

To disable "listen-only" mode press 96.

Audio File The audio file from the call on September 25th (uploaded after the call): File:120925 F5 Time-course telecon.zip

September 18th

Chair: Carsten Daub

AGENDA

1. Brief intro about the J2E and K562 differentiation system by Louise Winteringham File:REGULATION OF ERYTHROID DIFFERENTIATION.pdf

2. Outline and discussion about the Erythropoiesis time-course satellite paper

2.1 Preliminary plans for analysis by Sandelin group File:File3.pdf

2.2 Presentation by Andreas Lennartsson File:Lennartsson.pdf

3. Other topics, if any

Audio File The audio file from the call on September 18th (uploaded after the call): File:120918 F5 Time-course telecon.zip

September 11th

Chair: Carsten Daub

AGENDA

1. Presentation by Thomas and Anthony File:TH AM 120911.pdf

2. Discussion about Time-course Main Paper validation experiments File:ValidationExperimentDiscussion Carsten 2012-09-11.pdf

3. Other topics, if any

Audio File The audio file from the call on September 11th (uploaded after the call): File:120911 F5 Time-course telecon.zip

September 4th

Chair: Carsten Daub

AGENDA

1. Setup and general goals for the time-courses (phase II) [Introduction by Carsten Daub (20 min)] File:Presentation Carsten 2012-09-04.pdf

2. Available resources for the time-courses [Presentation by Erik Arner (20 min)] File:Timecourse summary 20120904.pptx

3. Validation experiments - what type of validation experiments will have most impact? [Discussion, lead by Carsten (15 min)]

4. Other questions

Audio File The audio file from the call on September 4th (uploaded after the call): File:120904 F5 Time-course telecon.zip