Requests and fixes: Difference between revisions
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== <span class="Apple-style-span" style="font-size: 13px; ">Please use this page to record any errors that need to be fixed or additional requests |
== <span class="Apple-style-span" style="font-size: 13px; ">Please use this page to record any errors that need to be fixed or additional requests, regarding to sample information </span> == |
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=== Errors that need to be fixed === |
=== Errors that need to be fixed === |
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1. Fetal temporal lobe and fetal duodenum labeling swap. |
<strike>1. Fetal temporal lobe and fetal duodenum labeling swap. </strike> |
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<strike>*CNhs12996 -should be labelled as duodenum, fetal, donor1, tech_rep2</strike> |
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<strike>*CNhs12997 - should be labelled as temporal lobe, fetal, donor1, tech_rep2</strike> |
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Requested by: Margherita Francescatto |
<strike>Requested by: Margherita Francescatto</strike> |
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Handled by: Al Forrest and Marina Lizio |
<strike>Handled by: Al Forrest and Marina Lizio</strike> |
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Status: |
<strike>Status: COMPLETED</strike> |
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<strike>Fixed at: will be reflected in UPDATE_014</strike> |
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<strike>2. Mouse Neurons - company labelling mistake (swap substantia nigra 1,2,3 to cortical)</strike> |
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<strike>*CNhs12025 - should be labelled as Neurons – cortical donor1</strike> |
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<strike>*CNhs11947 - should be labelled as Neurons – cortical donor2</strike> |
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<strike>*CNhs12112 - should be labelled as Neurons – cortical donor3</strike> |
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<strike>Status: COMPLETED</strike> |
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<strike>Fixed at: will be reflected in UPDATE_014</strike> |
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=== Other requests === |
=== Other requests === |
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<strike>Status: COMPLETED</strike> |
<strike>Status: COMPLETED</strike> |
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2. Update |
<strike>2. Update tissue type and strain information on mouse samples: |
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Mouse CD19+ B Cells donor1, |
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Mouse CD8+ T Cells donor1, |
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Mouse CD4+ T Cells donor1 |
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Requested by: Nicolas Bertin |
Requested by: Nicolas Bertin |
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Handled by: |
Handled by: Marina Lizio, Fukuda Shiro |
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Status: |
Status: COMPLETED</strike> |
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Status: IN PROGRESS |
Status: IN PROGRESS |
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4. Change name of endothelial progenitor cells to CD14+ monocyte derived endothelial progenitor cells |
<strike>4. Change name of endothelial progenitor cells to CD14+ monocyte derived endothelial progenitor cells</strike> |
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Requested by: David Hume |
<strike>Requested by: David Hume</strike> |
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Handled by: |
<strike>Handled by: Marina Lizio</strike> |
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Status: |
<strike>Status: COMPLETED</strike> |
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<strike>Fixed at: will be reflected in UPDATE_014</strike> |
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Status: IN PROGRESS (labelling has been checked in WP1 and WP2 - OK, NH profiles - clearly NH. Outlier NH samples suggest possible switch, recommend checking by qRTPCR) |
Status: IN PROGRESS (labelling has been checked in WP1 and WP2 - OK, NH profiles - clearly NH. Outlier NH samples suggest possible switch, recommend checking by qRTPCR) |
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Fixed at: UPDATE_### |
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<br> |
<br> |
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<strike>7. Mouse multiple Donor Samples data for Aortic Smooth Muscle Cells</strike> |
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6. |
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<strike>Requested by: Intikhab Alam (KAUST).</strike> |
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<strike>Handled by: Alistair Forest</strike> |
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<strike>Status: COMPLETED, the Aortic SMCs from mouse were a custom order from a pool of mice, there is no additional donor to run.</strike> |
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<br> |
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<strike>8. Incorrect file names for libraries CNhs12310 and CNhs12316. |
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*CNhs12310 should be labelled as medial frontal gyrus, adult donor10252 |
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*CNhs12316 should be labelled as medial temporal gyrus, adult donor10252 |
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Requested by: Margherita Francescatto (VUmc). |
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Handled by: ... |
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Status: ...</strike> |
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<br> |
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<strike>9. Reticulocyte samples CNhs13552_ctss and CNhs13553_ctss should be relabelled as CD34 cells differentiated to erythrocyte lineage. |
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Requested by: Kim Summers |
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Handled by: ... |
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Status: ...</strike> |
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Latest revision as of 14:31, 23 March 2012
Please use this page to record any errors that need to be fixed or additional requests, regarding to sample information
Errors that need to be fixed
1. Fetal temporal lobe and fetal duodenum labeling swap.
*CNhs12996 -should be labelled as duodenum, fetal, donor1, tech_rep2
*CNhs12997 - should be labelled as temporal lobe, fetal, donor1, tech_rep2
Requested by: Margherita Francescatto
Handled by: Al Forrest and Marina Lizio
Status: COMPLETED
Fixed at: will be reflected in UPDATE_014
2. Mouse Neurons - company labelling mistake (swap substantia nigra 1,2,3 to cortical)
*CNhs12025 - should be labelled as Neurons – cortical donor1
*CNhs11947 - should be labelled as Neurons – cortical donor2
*CNhs12112 - should be labelled as Neurons – cortical donor3
Requested by: Al Forrest
Handled by: Marina Lizio
Status: COMPLETED
Fixed at: will be reflected in UPDATE_014
Other requests
1. Create a bug fix/request page
Requested by: Kim Summers
Handled by: Al Forrest
Status: COMPLETED
2. Update tissue type and strain information on mouse samples:
Mouse CD19+ B Cells donor1,
Mouse CD8+ T Cells donor1,
Mouse CD4+ T Cells donor1
Requested by: Nicolas Bertin
Handled by: Marina Lizio, Fukuda Shiro
Status: COMPLETED
3. Provide details on whether samples were cultured or not
Requested by: David Hume, John Archer
Handled by: Al Forrest
Status: IN PROGRESS
4. Change name of endothelial progenitor cells to CD14+ monocyte derived endothelial progenitor cells
Requested by: David Hume
Handled by: Marina Lizio
Status: COMPLETED
Fixed at: will be reflected in UPDATE_014
5. Check NH cell sample profiles for possibility of swap
Requested by: Harukazu Suzuki, Nicolas Bertin
Handled by: Al Forrest
Status: IN PROGRESS (labelling has been checked in WP1 and WP2 - OK, NH profiles - clearly NH. Outlier NH samples suggest possible switch, recommend checking by qRTPCR)
Fixed at: UPDATE_###
7. Mouse multiple Donor Samples data for Aortic Smooth Muscle Cells
Requested by: Intikhab Alam (KAUST).
Handled by: Alistair Forest
Status: COMPLETED, the Aortic SMCs from mouse were a custom order from a pool of mice, there is no additional donor to run.
8. Incorrect file names for libraries CNhs12310 and CNhs12316.
- CNhs12310 should be labelled as medial frontal gyrus, adult donor10252
- CNhs12316 should be labelled as medial temporal gyrus, adult donor10252
Requested by: Margherita Francescatto (VUmc).
Handled by: ...
Status: ...
9. Reticulocyte samples CNhs13552_ctss and CNhs13553_ctss should be relabelled as CD34 cells differentiated to erythrocyte lineage.
Requested by: Kim Summers
Handled by: ...
Status: ...
