View source for Motif activity calculations on UPDATE 010

== Methodology ==

Motif activities were calculated for all samples for all five organisms using an approach similar to the MARA analysis developed by Erik and Piotr during FANTOM4. First, transcription factor binding sites were predicted in the -300..+100 base pair region around each level-2 promoter in the UPDATE_010 data set. Phylogeny information was included by using the whole-genome alignments from UCSC, but to speed up the calculations no local realignment was done. Note that the species included in the phylogenetic tree depend on what is available from UCSC, and therefore is different for each organism for which we have data. I used the following organisms:

*Human: hg19, rheMac2, mm9, rn4, bosTau4, equCab2, canFam2, monDom5, galGal3
*Mouse: mm9, rn4, hg18, rheMac2, bosTau3, equCab1, canFam2, monDom4, galGal3
*Rat: rn4, mm8, hg18, canFam2, bosTau2, monDom4, galGal2
*Dog: canFam2, hg17, mm6, rn3
*Chicken: galGal3, hg18, mm8, rn4, monDom4

Whether phylogeny information should be included at all, and if so, how, is up for debate, but this is what I did for now.

Next, I associated TFBSs to promoters using a distance profile, which models the positions with respect to the promoter at which TFBSs are typically found. This distance profile is estimated for each motif separately and is based on the overall distribution of predicted TFBS positions with respect to level-2 promoters.

The motif activities were then calculated in two ways. First, I applied Motif Activity Response Analysis (MARA) to the promoters with their associated TFBSs and CAGE expression profiles. This calculation is virtually identical to MARA as used in FANTOM4. Note that MARA effectively estimates the motif activities such that it can optimally explain the differences in CAGE expression between the experimental conditions. Therefore, each calculated motif activity depends on the set of conditions on which MARA was performed. To calculate activities independently of each other, I also calculated the motif activities on each condition separately, without the normalization over each condition as is done in MARA. To distinguish this calculation from MARA, I refer to it as MASA (正; Motif Activity State Analysis, as it looks at the motif activities in a single state). Effectively this calculates the TFBS presence near CAGE promoters weighted by the expression of the promoter. Unfortunately this causes a different problem: Ubiquitously expressed genes have high MASA scores, but don't distinguish between cell types (see the MASA pictures below). I therefore also calculated Z-scores for each MASA score with respect to the MASA scores for the same motif in the other cell types (this of course suffers from the same drawback as MARA, and I am not sure yet if we have gained anything here).

To visually represent the motif activities for each organism, I performed complete-linkage hierarchical clustering on the motifs and on the cell types. Heat maps for the MARA activities, MASA activities, and Z-values are below. I then ranked the motifs by their Z-values in each condition for each organism. Below is a table of the first-ranked motif for each organism in each cell type.

Using the MARA activities, I also calculated the predicted regulatory network (using the same approach as in FANTOM4).

I uploaded four types of files:
*assembly.activities.mara: The motif activities as calculated by MARA
*assembly.activities.masa: The motif activities as calculated by MASA
*assembly.zvalues.masa: The Z-values calculated from the MASA scores
*assembly.network: The transcriptional regulatory network predicted by MARA.
where "assembly" is hg19, mm9, rn4, canFam2, or galGal3.

--Michiel, 2011.03.04

== Heatmaps ==

{| class="wikitable" border="1"
! Organism || MARA activities || MASA activities || MASA Z-values
|-
!hg19 || [[Media:hg19.activities.mara.pdf]] || [[Media:hg19.activities.masa.pdf]] || [[Media:hg19.zvalues.masa.pdf]]
|-
!mm9 || [[Media:mm9.activities.mara.pdf]] || [[Media:mm9.activities.masa.pdf]] || [[Media:mm9.zvalues.masa.pdf]]
|-
!rn4 || [[Media:rn4.activities.mara.pdf]] || [[Media:rn4.activities.masa.pdf]] || [[Media:rn4.zvalues.masa.pdf]]
|-
!canFam2 || [[Media:canFam2.activities.mara.pdf]] || [[Media:canFam2.activities.masa.pdf]] || [[Media:canFam2.zvalues.masa.pdf]]
|-
!galGal3 || [[Media:galGal3.activities.mara.pdf]] || [[Media:galGal3.activities.masa.pdf]] || [[Media:galGal3.zvalues.masa.pdf]]
|-
|}

== Data files ==

{| class="wikitable" border="1"
! Organism || MARA activities || MASA activities || MASA Z-values || MARA network
|-
!hg19 || [[Media:hg19.activities.mara.gz]] || [[Media:hg19.activities.masa.gz]] || [[Media:hg19.zvalues.masa.gz]] || [[Media:hg19.network.gz]]
|-
!mm9 || [[Media:mm9.activities.mara.gz]] || [[Media:mm9.activities.masa.gz]] || [[Media:mm9.zvalues.masa.gz]] || [[Media:mm9.network.gz]]
|-
!rn4 || [[Media:rn4.activities.mara.gz]] || [[Media:rn4.activities.masa.gz]] || [[Media:rn4.zvalues.masa.gz]] || [[Media:rn4.network.gz]]
|-
!canFam2 || [[Media:canFam2.activities.mara.gz]] || [[Media:canFam2.activities.masa.gz]] || [[Media:canFam2.zvalues.masa.gz]] || [[Media:canFam2.network.gz]]
|-
!galGal3 || [[Media:galGal3.activities.mara.gz]] || [[Media:galGal3.activities.masa.gz]] || [[Media:galGal3.zvalues.masa.gz]] || [[Media:galGal3.network.gz]]
|-
|}

== Top-ranked motif per organism and cell type ==

* [[Top-ranked motifs for hg19]]
* [[Top-ranked motifs for mm9]]
* [[Top-ranked motifs for rn4]]
* [[Top-ranked motifs for canFam2]]
* [[Top-ranked motifs for galGal3]]

	
== Spearman correlation between the motif activity and the CAGE expression level of the corresponding transcription factor(s) ==
	 
These correlations were calculated from the Z-values of the MASA-results above; using the MARA values or using the MASA values directly gives very similar results. The list below is sorted from highest correlation to lowest. Overall, there is no clear tendency for the motif activity and the expression levels to be correlated, as shown by this histogram. However, some motifs, such as E2F1..5, show a clear correlation.
	 
[[File:motif_expression_correlations_histogram.png]]


{| class="wikitable" border="1"
! Motif || Transcription factor gene || Spearman correlation || Scatter plot
|-
|| E2F1..5 || E2F3 || 0.841683 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/E2F1..5_E2F3.png]] 
|-
|| E2F1..5 || E2F1 || 0.816086 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/E2F1..5_E2F1.png]] 
|-
|| FOS_FOS_B,L1__JUN_B,D_ || FOSL1 || 0.787015 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/FOS_FOS_B,L1__JUN_B,D__FOSL1.png]] 
|-
|| HMGA1,2 || HMGA1 || 0.686243 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/HMGA1,2_HMGA1.png]] 
|-
|| TFDP1 || TFDP1 || 0.671864 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/TFDP1_TFDP1.png]] 
|-
|| E2F1..5 || E2F2 || 0.627630 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/E2F1..5_E2F2.png]] 
|-
|| IRF1,2 || IRF1 || 0.597349 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/IRF1,2_IRF1.png]] 
|-
|| ELF1,2,4 || ELF2 || 0.569108 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/ELF1,2,4_ELF2.png]] 
|-
|| E2F1..5 || E2F4 || 0.568816 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/E2F1..5_E2F4.png]] 
|-
|| IRF1,2 || IRF2 || 0.566674 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/IRF1,2_IRF2.png]] 
|-
|| ELF1,2,4 || ELF1 || 0.565809 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/ELF1,2,4_ELF1.png]] 
|-
|| TEAD1 || TEAD1 || 0.560307 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/TEAD1_TEAD1.png]] 
|-
|| MEF2_A,B,C,D_ || MEF2C || 0.554162 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/MEF2_A,B,C,D__MEF2C.png]] 
|-
|| RFX2..5_RFXANK_RFXAP || RFX3 || 0.546216 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/RFX2..5_RFXANK_RFXAP_RFX3.png]] 
|-
|| SPIB || SPIB || 0.545655 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/SPIB_SPIB.png]] 
|-
|| SMAD1..7,9 || SMAD9 || 0.543776 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/SMAD1..7,9_SMAD9.png]] 
|-
|| NFKB1_REL_RELA || NFKB1 || 0.534954 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/NFKB1_REL_RELA_NFKB1.png]] 
|-
|| ARNT_ARNT2_BHLHB2_MAX_MYC_USF1 || MYC || 0.513085 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/ARNT_ARNT2_BHLHB2_MAX_MYC_USF1_MYC.png]] 
|-
|| HAND1,2 || HAND2 || 0.465248 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/HAND1,2_HAND2.png]] 
|-
|| NFY_A,B,C_ || NFYB || 0.458054 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/NFY_A,B,C__NFYB.png]] 
|-
|| NFATC1..3 || NFATC1 || 0.457514 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/NFATC1..3_NFATC1.png]] 
|-
|| ELK1,4_GABP_A,B1_ || ELK1 || 0.450242 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/ELK1,4_GABP_A,B1__ELK1.png]] 
|-
|| RUNX1..3 || RUNX3 || 0.441659 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/RUNX1..3_RUNX3.png]] 
|-
|| NFKB1_REL_RELA || REL || 0.440886 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/NFKB1_REL_RELA_REL.png]] 
|-
|| MYFfamily || MYOD1 || 0.439002 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/MYFfamily_MYOD1.png]] 
|-
|| RUNX1..3 || RUNX1 || 0.438840 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/RUNX1..3_RUNX1.png]] 
|-
|| CEBPA,B_DDIT3 || CEBPB || 0.437270 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/CEBPA,B_DDIT3_CEBPB.png]] 
|-
|| CEBPA,B_DDIT3 || DDIT3 || 0.436120 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/CEBPA,B_DDIT3_DDIT3.png]] 
|-
|| SOX17 || SOX17 || 0.431799 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/SOX17_SOX17.png]] 
|-
|| FOXO1,3,4 || FOXO4 || 0.427194 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/FOXO1,3,4_FOXO4.png]] 
|-
|| YY1 || YY1 || 0.421768 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/YY1_YY1.png]] 
|-
|| NFY_A,B,C_ || NFYC || 0.421628 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/NFY_A,B,C__NFYC.png]] 
|-
|| ELK1,4_GABP_A,B1_ || GABPB1 || 0.419064 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/ELK1,4_GABP_A,B1__GABPB1.png]] 
|-
|| IRF7 || IRF7 || 0.412893 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/IRF7_IRF7.png]] 
|-
|| CREB1 || CREB1 || 0.410191 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/CREB1_CREB1.png]] 
|-
|| FOSL2 || FOSL2 || 0.408064 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/FOSL2_FOSL2.png]] 
|-
|| MYFfamily || MYF6 || 0.388749 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/MYFfamily_MYF6.png]] 
|-
|| ELK1,4_GABP_A,B1_ || GABPA || 0.386305 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/ELK1,4_GABP_A,B1__GABPA.png]] 
|-
|| MEF2_A,B,C,D_ || MEF2B || 0.380190 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/MEF2_A,B,C,D__MEF2B.png]] 
|-
|| SP1 || SP1 || 0.370936 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/SP1_SP1.png]] 
|-
|| NFY_A,B,C_ || NFYA || 0.367718 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/NFY_A,B,C__NFYA.png]] 
|-
|| MEF2_A,B,C,D_ || MEF2D || 0.365749 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/MEF2_A,B,C,D__MEF2D.png]] 
|-
|| SOX2 || SOX2 || 0.365530 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/SOX2_SOX2.png]] 
|-
|| NRF1 || NRF1 || 0.361426 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/NRF1_NRF1.png]] 
|-
|| ZNF143 || ZNF143 || 0.356887 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/ZNF143_ZNF143.png]] 
|-
|| POU6F1 || POU6F1 || 0.356494 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/POU6F1_POU6F1.png]] 
|-
|| FOX_C1,C2_ || FOXC2 || 0.355895 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/FOX_C1,C2__FOXC2.png]] 
|-
|| RFX2..5_RFXANK_RFXAP || RFXAP || 0.354397 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/RFX2..5_RFXANK_RFXAP_RFXAP.png]] 
|-
|| ATF4 || ATF4 || 0.353503 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/ATF4_ATF4.png]] 
|-
|| ETS1,2 || ETS1 || 0.351178 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/ETS1,2_ETS1.png]] 
|-
|| MEF2_A,B,C,D_ || MEF2A || 0.347177 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/MEF2_A,B,C,D__MEF2A.png]] 
|-
|| ELF1,2,4 || ELF4 || 0.345478 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/ELF1,2,4_ELF4.png]] 
|-
|| NFE2L1 || NFE2L1 || 0.338455 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/NFE2L1_NFE2L1.png]] 
|-
|| FOXO1,3,4 || FOXO1 || 0.334483 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/FOXO1,3,4_FOXO1.png]] 
|-
|| HNF1A || HNF1A || 0.329089 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/HNF1A_HNF1A.png]] 
|-
|| HIF1A || HIF1A || 0.326498 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/HIF1A_HIF1A.png]] 
|-
|| MAFB || MAFB || 0.319747 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/MAFB_MAFB.png]] 
|-
|| EBF1 || EBF1 || 0.316888 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/EBF1_EBF1.png]] 
|-
|| SPI1 || SPI1 || 0.313089 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/SPI1_SPI1.png]] 
|-
|| MYFfamily || MYOG || 0.305667 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/MYFfamily_MYOG.png]] 
|-
|| AHR_ARNT_ARNT2 || ARNT2 || 0.296098 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/AHR_ARNT_ARNT2_ARNT2.png]] 
|-
|| JUN || JUND || 0.295237 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/JUN_JUND.png]] 
|-
|| ZFP161 || ZFP161 || 0.295189 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/ZFP161_ZFP161.png]] 
|-
|| ESRRA || ESRRA || 0.294840 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/ESRRA_ESRRA.png]] 
|-
|| HNF4A_NR2F1,2 || HNF4A || 0.293899 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/HNF4A_NR2F1,2_HNF4A.png]] 
|-
|| FOXO1,3,4 || FOXO3 || 0.292591 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/FOXO1,3,4_FOXO3.png]] 
|-
|| RFX1 || RFX1 || 0.289249 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/RFX1_RFX1.png]] 
|-
|| TP53 || TP53 || 0.288418 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/TP53_TP53.png]] 
|-
|| JUN || JUN || 0.287065 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/JUN_JUN.png]] 
|-
|| STAT1,3 || STAT1 || 0.285049 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/STAT1,3_STAT1.png]] 
|-
|| LEF1_TCF7_TCF7L1,2 || TCF7L1 || 0.282803 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/LEF1_TCF7_TCF7L1,2_TCF7L1.png]] 
|-
|| FOXP1 || FOXP1 || 0.280522 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/FOXP1_FOXP1.png]] 
|-
|| RFX2..5_RFXANK_RFXAP || RFX2 || 0.280221 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/RFX2..5_RFXANK_RFXAP_RFX2.png]] 
|-
|| SMAD1..7,9 || SMAD6 || 0.279935 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/SMAD1..7,9_SMAD6.png]] 
|-
|| MYFfamily || MYF5 || 0.277773 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/MYFfamily_MYF5.png]] 
|-
|| TFAP2_A,C_ || TFAP2C || 0.276803 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/TFAP2_A,C__TFAP2C.png]] 
|-
|| DBP || DBP || 0.274124 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/DBP_DBP.png]] 
|-
|| SRF || SRF || 0.272955 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/SRF_SRF.png]] 
|-
|| HBP1_HMGB_SSRP1_UBTF || HMGB2 || 0.270943 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/HBP1_HMGB_SSRP1_UBTF_HMGB2.png]] 
|-
|| bHLH_family || MXD3 || 0.266357 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/bHLH_family_MXD3.png]] 
|-
|| NFATC1..3 || NFATC2 || 0.261042 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/NFATC1..3_NFATC2.png]] 
|-
|| FOS_FOS_B,L1__JUN_B,D_ || JUNB || 0.258667 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/FOS_FOS_B,L1__JUN_B,D__JUNB.png]] 
|-
|| HBP1_HMGB_SSRP1_UBTF || HBP1 || 0.258615 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/HBP1_HMGB_SSRP1_UBTF_HBP1.png]] 
|-
|| bHLH_family || HES6 || 0.255850 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/bHLH_family_HES6.png]] 
|-
|| SNAI1..3 || SNAI3 || 0.252970 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/SNAI1..3_SNAI3.png]] 
|-
|| DMAP1_NCOR_1,2__SMARC || SMARCA5 || 0.251573 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/DMAP1_NCOR_1,2__SMARC_SMARCA5.png]] 
|-
|| NFKB1_REL_RELA || RELA || 0.250287 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/NFKB1_REL_RELA_RELA.png]] 
|-
|| SMAD1..7,9 || SMAD4 || 0.248788 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/SMAD1..7,9_SMAD4.png]] 
|-
|| SOX_8,9,10_ || SOX9 || 0.248325 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/SOX_8,9,10__SOX9.png]] 
|-
|| SMAD1..7,9 || SMAD1 || 0.247502 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/SMAD1..7,9_SMAD1.png]] 
|-
|| SOX_8,9,10_ || SOX8 || 0.243049 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/SOX_8,9,10__SOX8.png]] 
|-
|| AHR_ARNT_ARNT2 || ARNT || 0.240579 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/AHR_ARNT_ARNT2_ARNT.png]] 
|-
|| NFIL3 || NFIL3 || 0.236421 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/NFIL3_NFIL3.png]] 
|-
|| ETS1,2 || ETS2 || 0.235928 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/ETS1,2_ETS2.png]] 
|-
|| EP300 || EP300 || 0.234088 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/EP300_EP300.png]] 
|-
|| RUNX1..3 || RUNX2 || 0.229801 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/RUNX1..3_RUNX2.png]] 
|-
|| ARNT_ARNT2_BHLHB2_MAX_MYC_USF1 || MAX || 0.224185 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/ARNT_ARNT2_BHLHB2_MAX_MYC_USF1_MAX.png]] 
|-
|| NHLH1,2 || NHLH2 || 0.222854 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/NHLH1,2_NHLH2.png]] 
|-
|| MYB || MYB || 0.215738 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/MYB_MYB.png]] 
|-
|| GTF2A1,2 || GTF2A2 || 0.214222 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/GTF2A1,2_GTF2A2.png]] 
|-
|| GTF2I || GTF2I || 0.211486 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/GTF2I_GTF2I.png]] 
|-
|| STAT2,4,6 || STAT6 || 0.205898 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/STAT2,4,6_STAT6.png]] 
|-
|| TAL1_TCF_3,4,12_ || TCF3 || 0.205632 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/TAL1_TCF_3,4,12__TCF3.png]] 
|-
|| VSX1,2 || VSX1 || 0.203498 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/VSX1,2_VSX1.png]] 
|-
|| TFAP2_A,C_ || TFAP2A || 0.202943 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/TFAP2_A,C__TFAP2A.png]] 
|-
|| NKX3-1 || NKX3-1 || 0.201749 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/NKX3-1_NKX3-1.png]] 
|-
|| HIC1 || HIC1 || 0.201551 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/HIC1_HIC1.png]] 
|-
|| POU2F1..3 || POU2F1 || 0.201246 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/POU2F1..3_POU2F1.png]] 
|-
|| GTF2A1,2 || GTF2A1 || 0.197263 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/GTF2A1,2_GTF2A1.png]] 
|-
|| POU3F1..4 || POU3F2 || 0.194055 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/POU3F1..4_POU3F2.png]] 
|-
|| VSX1,2 || VSX2 || 0.189519 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/VSX1,2_VSX2.png]] 
|-
|| TLX1..3_NFIC_dimer_ || TLX1 || 0.187962 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/TLX1..3_NFIC_dimer__TLX1.png]] 
|-
|| PITX1..3 || PITX1 || 0.186101 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/PITX1..3_PITX1.png]] 
|-
|| FOXA2 || FOXA2 || 0.183837 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/FOXA2_FOXA2.png]] 
|-
|| POU2F1..3 || POU2F3 || 0.182298 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/POU2F1..3_POU2F3.png]] 
|-
|| POU2F1..3 || POU2F2 || 0.177903 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/POU2F1..3_POU2F2.png]] 
|-
|| FOXP3 || FOXP3 || 0.177792 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/FOXP3_FOXP3.png]] 
|-
|| ARNT_ARNT2_BHLHB2_MAX_MYC_USF1 || USF1 || 0.176758 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/ARNT_ARNT2_BHLHB2_MAX_MYC_USF1_USF1.png]] 
|-
|| EGR1..3 || EGR2 || 0.176213 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/EGR1..3_EGR2.png]] 
|-
|| FOX_F1,F2,J1_ || FOXJ1 || 0.173193 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/FOX_F1,F2,J1__FOXJ1.png]] 
|-
|| RORA || RORA || 0.172773 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/RORA_RORA.png]] 
|-
|| POU3F1..4 || POU3F4 || 0.172656 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/POU3F1..4_POU3F4.png]] 
|-
|| HNF4A_NR2F1,2 || NR2F2 || 0.157303 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/HNF4A_NR2F1,2_NR2F2.png]] 
|-
|| FOXD3 || FOXD3 || 0.154134 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/FOXD3_FOXD3.png]] 
|-
|| ATF2 || ATF2 || 0.153517 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/ATF2_ATF2.png]] 
|-
|| ADNP_IRX_SIX_ZHX || ADNP || 0.153422 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/ADNP_IRX_SIX_ZHX_ADNP.png]] 
|-
|| PDX1 || PDX1 || 0.152632 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/PDX1_PDX1.png]] 
|-
|| NR1H4 || NR1H4 || 0.148988 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/NR1H4_NR1H4.png]] 
|-
|| PRRX1,2 || PRRX2 || 0.148726 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/PRRX1,2_PRRX2.png]] 
|-
|| NKX2-2,8 || NKX2-2 || 0.148446 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/NKX2-2,8_NKX2-2.png]] 
|-
|| RXRA_VDR_dimer_ || VDR || 0.146062 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/RXRA_VDR_dimer__VDR.png]] 
|-
|| FOXL1 || FOXL1 || 0.145980 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/FOXL1_FOXL1.png]] 
|-
|| LEF1_TCF7_TCF7L1,2 || TCF7L2 || 0.143538 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/LEF1_TCF7_TCF7L1,2_TCF7L2.png]] 
|-
|| XBP1 || XBP1 || 0.142011 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/XBP1_XBP1.png]] 
|-
|| SOX_8,9,10_ || SOX10 || 0.141618 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/SOX_8,9,10__SOX10.png]] 
|-
|| RXR_A,B,G_ || RXRG || 0.138791 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/RXR_A,B,G__RXRG.png]] 
|-
|| EGR1..3 || EGR3 || 0.137448 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/EGR1..3_EGR3.png]] 
|-
|| SMAD1..7,9 || SMAD3 || 0.133554 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/SMAD1..7,9_SMAD3.png]] 
|-
|| NKX2-2,8 || NKX2-8 || 0.130732 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/NKX2-2,8_NKX2-8.png]] 
|-
|| PRDM1 || PRDM1 || 0.130111 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/PRDM1_PRDM1.png]] 
|-
|| RBPJ || RBPJ || 0.126726 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/RBPJ_RBPJ.png]] 
|-
|| CEBPA,B_DDIT3 || CEBPA || 0.121052 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/CEBPA,B_DDIT3_CEBPA.png]] 
|-
|| bHLH_family || HEY1 || 0.119493 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/bHLH_family_HEY1.png]] 
|-
|| AHR_ARNT_ARNT2 || AHR || 0.117428 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/AHR_ARNT_ARNT2_AHR.png]] 
|-
|| ESR1 || ESR1 || 0.115442 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/ESR1_ESR1.png]] 
|-
|| ZIC1..3 || ZIC1 || 0.113777 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/ZIC1..3_ZIC1.png]] 
|-
|| NR5A1,2 || NR5A2 || 0.109033 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/NR5A1,2_NR5A2.png]] 
|-
|| bHLH_family || OLIG2 || 0.104603 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/bHLH_family_OLIG2.png]] 
|-
|| FOX_F1,F2,J1_ || FOXF2 || 0.104598 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/FOX_F1,F2,J1__FOXF2.png]] 
|-
|| HNF4A_NR2F1,2 || NR2F1 || 0.103058 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/HNF4A_NR2F1,2_NR2F1.png]] 
|-
|| NR6A1 || NR6A1 || 0.100385 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/NR6A1_NR6A1.png]] 
|-
|| NANOG_mouse_ || NANOG || 0.099938 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/NANOG_mouse__NANOG.png]] 
|-
|| SOX5 || SOX5 || 0.099262 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/SOX5_SOX5.png]] 
|-
|| ADNP_IRX_SIX_ZHX || SIX2 || 0.095746 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/ADNP_IRX_SIX_ZHX_SIX2.png]] 
|-
|| HMX1 || HMX1 || 0.092173 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/HMX1_HMX1.png]] 
|-
|| HAND1,2 || HAND1 || 0.091690 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/HAND1,2_HAND1.png]] 
|-
|| E2F1..5 || E2F5 || 0.091342 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/E2F1..5_E2F5.png]] 
|-
|| ARNT_ARNT2_BHLHB2_MAX_MYC_USF1 || ARNT || 0.090402 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/ARNT_ARNT2_BHLHB2_MAX_MYC_USF1_ARNT.png]] 
|-
|| STAT5_A,B_ || STAT5B || 0.089589 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/STAT5_A,B__STAT5B.png]] 
|-
|| GFI1 || GFI1 || 0.088742 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/GFI1_GFI1.png]] 
|-
|| STAT2,4,6 || STAT2 || 0.088383 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/STAT2,4,6_STAT2.png]] 
|-
|| TLX1..3_NFIC_dimer_ || TLX3 || 0.086683 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/TLX1..3_NFIC_dimer__TLX3.png]] 
|-
|| ARID5B || ARID5B || 0.084674 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/ARID5B_ARID5B.png]] 
|-
|| CRX || CRX || 0.084349 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/CRX_CRX.png]] 
|-
|| KLF4 || KLF4 || 0.079121 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/KLF4_KLF4.png]] 
|-
|| RXR_A,B,G___NR1H2,PPAR_dimers || NR1H2 || 0.077426 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/RXR_A,B,G___NR1H2,PPAR_dimers_NR1H2.png]] 
|-
|| HOX_A4,D4_ || HOXA4 || 0.076449 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/HOX_A4,D4__HOXA4.png]] 
|-
|| RFX2..5_RFXANK_RFXAP || RFX5 || 0.076444 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/RFX2..5_RFXANK_RFXAP_RFX5.png]] 
|-
|| bHLH_family || HEY2 || 0.076300 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/bHLH_family_HEY2.png]] 
|-
|| RFX2..5_RFXANK_RFXAP || RFX4 || 0.075448 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/RFX2..5_RFXANK_RFXAP_RFX4.png]] 
|-
|| HSF1,2 || HSF1 || 0.073449 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/HSF1,2_HSF1.png]] 
|-
|| PAX2 || PAX2 || 0.070847 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/PAX2_PAX2.png]] 
|-
|| NANOG || NANOG || 0.070369 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/NANOG_NANOG.png]] 
|-
|| ADNP_IRX_SIX_ZHX || SIX5 || 0.070160 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/ADNP_IRX_SIX_ZHX_SIX5.png]] 
|-
|| TFCP2 || TFCP2 || 0.068274 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/TFCP2_TFCP2.png]] 
|-
|| MYBL2 || MYBL2 || 0.067085 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/MYBL2_MYBL2.png]] 
|-
|| HBP1_HMGB_SSRP1_UBTF || HMGB3 || 0.066710 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/HBP1_HMGB_SSRP1_UBTF_HMGB3.png]] 
|-
|| SREBF1,2 || SREBF2 || 0.062794 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/SREBF1,2_SREBF2.png]] 
|-
|| bHLH_family || MITF || 0.062051 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/bHLH_family_MITF.png]] 
|-
|| ADNP_IRX_SIX_ZHX || ZHX1 || 0.060156 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/ADNP_IRX_SIX_ZHX_ZHX1.png]] 
|-
|| DMAP1_NCOR_1,2__SMARC || NCOR1 || 0.059172 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/DMAP1_NCOR_1,2__SMARC_NCOR1.png]] 
|-
|| GFI1B || GFI1B || 0.057878 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/GFI1B_GFI1B.png]] 
|-
|| ALX4 || ALX4 || 0.057049 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/ALX4_ALX4.png]] 
|-
|| ZBTB6 || ZBTB6 || 0.056235 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/ZBTB6_ZBTB6.png]] 
|-
|| STAT2,4,6 || STAT4 || 0.054894 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/STAT2,4,6_STAT4.png]] 
|-
|| NR5A1,2 || NR5A1 || 0.052045 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/NR5A1,2_NR5A1.png]] 
|-
|| MSX1,2 || MSX1 || 0.051234 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/MSX1,2_MSX1.png]] 
|-
|| POU3F1..4 || POU3F1 || 0.050175 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/POU3F1..4_POU3F1.png]] 
|-
|| ZIC1..3 || ZIC3 || 0.048955 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/ZIC1..3_ZIC3.png]] 
|-
|| bHLH_family || ARNTL || 0.048502 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/bHLH_family_ARNTL.png]] 
|-
|| RXR_A,B,G___NR1H2,PPAR_dimers || RXRB || 0.045964 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/RXR_A,B,G___NR1H2,PPAR_dimers_RXRB.png]] 
|-
|| bHLH_family || OLIG1 || 0.045872 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/bHLH_family_OLIG1.png]] 
|-
|| KLF12 || KLF12 || 0.045677 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/KLF12_KLF12.png]] 
|-
|| POU3F1..4 || POU3F3 || 0.044229 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/POU3F1..4_POU3F3.png]] 
|-
|| NKX2-3_NKX2-5 || NKX2-5 || 0.043547 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/NKX2-3_NKX2-5_NKX2-5.png]] 
|-
|| NHLH1,2 || NHLH1 || 0.042690 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/NHLH1,2_NHLH1.png]] 
|-
|| BACH2 || BACH2 || 0.042438 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/BACH2_BACH2.png]] 
|-
|| GATA6 || GATA6 || 0.041663 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/GATA6_GATA6.png]] 
|-
|| LHX3,4 || LHX3 || 0.040380 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/LHX3,4_LHX3.png]] 
|-
|| RXR_A,B,G___NR1H2,PPAR_dimers || RXRA || 0.039914 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/RXR_A,B,G___NR1H2,PPAR_dimers_RXRA.png]] 
|-
|| HOX_A4,D4_ || HOXD4 || 0.038547 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/HOX_A4,D4__HOXD4.png]] 
|-
|| POU5F1 || POU5F1 || 0.037087 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/POU5F1_POU5F1.png]] 
|-
|| POU1F1 || POU1F1 || 0.036855 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/POU1F1_POU1F1.png]] 
|-
|| ARNT_ARNT2_BHLHB2_MAX_MYC_USF1 || ARNT2 || 0.035919 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/ARNT_ARNT2_BHLHB2_MAX_MYC_USF1_ARNT2.png]] 
|-
|| JUN || JUNB || 0.035788 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/JUN_JUNB.png]] 
|-
|| HLF || HLF || 0.034341 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/HLF_HLF.png]] 
|-
|| OCT4_SOX2_dimer_ || POU5F1 || 0.031286 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/OCT4_SOX2_dimer__POU5F1.png]] 
|-
|| MZF1 || MZF1 || 0.031243 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/MZF1_MZF1.png]] 
|-
|| TBX4,5 || TBX5 || 0.026384 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/TBX4,5_TBX5.png]] 
|-
|| FOS_FOS_B,L1__JUN_B,D_ || FOSB || 0.021261 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/FOS_FOS_B,L1__JUN_B,D__FOSB.png]] 
|-
|| TFAP4 || TFAP4 || 0.019944 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/TFAP4_TFAP4.png]] 
|-
|| PATZ1 || PATZ1 || 0.018723 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/PATZ1_PATZ1.png]] 
|-
|| ZNF238 || ZNF238 || 0.018716 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/ZNF238_ZNF238.png]] 
|-
|| HBP1_HMGB_SSRP1_UBTF || UBTF || 0.016290 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/HBP1_HMGB_SSRP1_UBTF_UBTF.png]] 
|-
|| RXR_A,B,G___NR1H2,PPAR_dimers || PPARG || 0.011687 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/RXR_A,B,G___NR1H2,PPAR_dimers_PPARG.png]] 
|-
|| GATA4 || GATA4 || 0.010309 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/GATA4_GATA4.png]] 
|-
|| SMAD1..7,9 || SMAD2 || 0.009052 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/SMAD1..7,9_SMAD2.png]] 
|-
|| SMAD1..7,9 || SMAD5 || 0.007724 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/SMAD1..7,9_SMAD5.png]] 
|-
|| SPZ1 || SPZ1 || 0.007261 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/SPZ1_SPZ1.png]] 
|-
|| ADNP_IRX_SIX_ZHX || IRX5 || 0.006931 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/ADNP_IRX_SIX_ZHX_IRX5.png]] 
|-
|| NFATC1..3 || NFATC3 || 0.006887 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/NFATC1..3_NFATC3.png]] 
|-
|| HBP1_HMGB_SSRP1_UBTF || SSRP1 || 0.006680 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/HBP1_HMGB_SSRP1_UBTF_SSRP1.png]] 
|-
|| NKX2-1,4 || NKX2-1 || 0.002890 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/NKX2-1,4_NKX2-1.png]] 
|-
|| TAL1_TCF_3,4,12_ || TCF12 || 0.002631 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/TAL1_TCF_3,4,12__TCF12.png]] 
|-
|| FOXQ1 || FOXQ1 || 0.001169 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/FOXQ1_FOXQ1.png]] 
|-
|| ONECUT1,2 || ONECUT2 || -0.001663 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/ONECUT1,2_ONECUT2.png]] 
|-
|| MSX1,2 || MSX2 || -0.002938 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/MSX1,2_MSX2.png]] 
|-
|| LMO2 || LMO2 || -0.004032 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/LMO2_LMO2.png]] 
|-
|| CDC5L || CDC5L || -0.004116 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/CDC5L_CDC5L.png]] 
|-
|| ATF5_CREB3 || ATF5 || -0.004958 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/ATF5_CREB3_ATF5.png]] 
|-
|| OCT4_SOX2_dimer_ || SOX2 || -0.006791 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/OCT4_SOX2_dimer__SOX2.png]] 
|-
|| ADNP_IRX_SIX_ZHX || IRX4 || -0.007307 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/ADNP_IRX_SIX_ZHX_IRX4.png]] 
|-
|| PAX6 || PAX6 || -0.011055 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/PAX6_PAX6.png]] 
|-
|| RXR_A,B,G_ || RXRB || -0.013317 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/RXR_A,B,G__RXRB.png]] 
|-
|| TFAP2B || TFAP2B || -0.016931 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/TFAP2B_TFAP2B.png]] 
|-
|| NFE2L2 || NFE2L2 || -0.017743 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/NFE2L2_NFE2L2.png]] 
|-
|| RXR_A,B,G___NR1H2,PPAR_dimers || PPARA || -0.018180 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/RXR_A,B,G___NR1H2,PPAR_dimers_PPARA.png]] 
|-
|| bHLH_family || HEYL || -0.019438 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/bHLH_family_HEYL.png]] 
|-
|| ADNP_IRX_SIX_ZHX || ZHX3 || -0.021360 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/ADNP_IRX_SIX_ZHX_ZHX3.png]] 
|-
|| MYOD1 || MYOD1 || -0.027445 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/MYOD1_MYOD1.png]] 
|-
|| NKX2-3_NKX2-5 || NKX2-3 || -0.027771 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/NKX2-3_NKX2-5_NKX2-3.png]] 
|-
|| SNAI1..3 || SNAI1 || -0.032412 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/SNAI1..3_SNAI1.png]] 
|-
|| REST || REST || -0.033128 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/REST_REST.png]] 
|-
|| HSF1,2 || HSF2 || -0.034159 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/HSF1,2_HSF2.png]] 
|-
|| LEF1_TCF7_TCF7L1,2 || TCF7 || -0.042013 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/LEF1_TCF7_TCF7L1,2_TCF7.png]] 
|-
|| NFE2 || NFE2 || -0.043868 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/NFE2_NFE2.png]] 
|-
|| CDX1,2,4 || CDX2 || -0.044348 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/CDX1,2,4_CDX2.png]] 
|-
|| bHLH_family || MXD4 || -0.044784 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/bHLH_family_MXD4.png]] 
|-
|| EGR1..3 || EGR1 || -0.045478 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/EGR1..3_EGR1.png]] 
|-
|| ONECUT1,2 || ONECUT1 || -0.046304 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/ONECUT1,2_ONECUT1.png]] 
|-
|| FOX_D1,D2_ || FOXD1 || -0.048518 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/FOX_D1,D2__FOXD1.png]] 
|-
|| AIRE || AIRE || -0.051075 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/AIRE_AIRE.png]] 
|-
|| GCM1,2 || GCM2 || -0.051530 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/GCM1,2_GCM2.png]] 
|-
|| FOX_F1,F2,J1_ || FOXF1 || -0.054904 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/FOX_F1,F2,J1__FOXF1.png]] 
|-
|| CUX2 || CUX2 || -0.055846 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/CUX2_CUX2.png]] 
|-
|| LHX3,4 || LHX4 || -0.056027 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/LHX3,4_LHX4.png]] 
|-
|| HOX_A5,B5_ || HOXB5 || -0.066447 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/HOX_A5,B5__HOXB5.png]] 
|-
|| NKX2-1,4 || NKX2-4 || -0.073380 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/NKX2-1,4_NKX2-4.png]] 
|-
|| PPARG || PPARG || -0.074323 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/PPARG_PPARG.png]] 
|-
|| STAT1,3 || STAT3 || -0.075259 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/STAT1,3_STAT3.png]] 
|-
|| HOXA9_MEIS1 || HOXA9 || -0.081168 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/HOXA9_MEIS1_HOXA9.png]] 
|-
|| bHLH_family || MXI1 || -0.083253 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/bHLH_family_MXI1.png]] 
|-
|| NR3C1 || NR3C1 || -0.091658 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/NR3C1_NR3C1.png]] 
|-
|| ATF6 || ATF6 || -0.094819 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/ATF6_ATF6.png]] 
|-
|| DMAP1_NCOR_1,2__SMARC || SMARCC2 || -0.096414 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/DMAP1_NCOR_1,2__SMARC_SMARCC2.png]] 
|-
|| AR || AR || -0.097115 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/AR_AR.png]] 
|-
|| GATA1..3 || GATA3 || -0.098243 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/GATA1..3_GATA3.png]] 
|-
|| NKX6-1,2 || NKX6-1 || -0.100540 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/NKX6-1,2_NKX6-1.png]] 
|-
|| bHLH_family || MLXIPL || -0.101816 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/bHLH_family_MLXIPL.png]] 
|-
|| PAX3,7 || PAX7 || -0.108886 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/PAX3,7_PAX7.png]] 
|-
|| BPTF || BPTF || -0.115037 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/BPTF_BPTF.png]] 
|-
|| ALX1 || ALX1 || -0.117144 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/ALX1_ALX1.png]] 
|-
|| PAX8 || PAX8 || -0.118184 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/PAX8_PAX8.png]] 
|-
|| FOS_FOS_B,L1__JUN_B,D_ || FOS || -0.118335 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/FOS_FOS_B,L1__JUN_B,D__FOS.png]] 
|-
|| MAZ || MAZ || -0.119779 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/MAZ_MAZ.png]] 
|-
|| TBP || TBP || -0.121494 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/TBP_TBP.png]] 
|-
|| FOX_I1,J2_ || FOXJ2 || -0.126419 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/FOX_I1,J2__FOXJ2.png]] 
|-
|| DMAP1_NCOR_1,2__SMARC || DMAP1 || -0.126591 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/DMAP1_NCOR_1,2__SMARC_DMAP1.png]] 
|-
|| FOX_I1,J2_ || FOXI1 || -0.133892 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/FOX_I1,J2__FOXI1.png]] 
|-
|| PAX1,9 || PAX9 || -0.134310 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/PAX1,9_PAX9.png]] 
|-
|| ADNP_IRX_SIX_ZHX || ZHX2 || -0.140813 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/ADNP_IRX_SIX_ZHX_ZHX2.png]] 
|-
|| CDX1,2,4 || CDX1 || -0.141211 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/CDX1,2,4_CDX1.png]] 
|-
|| bHLH_family || MNT || -0.143438 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/bHLH_family_MNT.png]] 
|-
|| PITX1..3 || PITX2 || -0.144940 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/PITX1..3_PITX2.png]] 
|-
|| FOXM1 || FOXM1 || -0.151562 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/FOXM1_FOXM1.png]] 
|-
|| PAX5 || PAX5 || -0.153646 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/PAX5_PAX5.png]] 
|-
|| RXR_A,B,G_ || RXRA || -0.157331 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/RXR_A,B,G__RXRA.png]] 
|-
|| HOX_A6,A7,B6,B7_ || HOXB7 || -0.161903 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/HOX_A6,A7,B6,B7__HOXB7.png]] 
|-
|| NKX6-1,2 || NKX6-2 || -0.162829 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/NKX6-1,2_NKX6-2.png]] 
|-
|| ZNF384 || ZNF384 || -0.165298 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/ZNF384_ZNF384.png]] 
|-
|| SREBF1,2 || SREBF1 || -0.177228 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/SREBF1,2_SREBF1.png]] 
|-
|| HOX_A6,A7,B6,B7_ || HOXA7 || -0.181028 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/HOX_A6,A7,B6,B7__HOXA7.png]] 
|-
|| PITX1..3 || PITX3 || -0.184486 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/PITX1..3_PITX3.png]] 
|-
|| SNAI1..3 || SNAI2 || -0.186187 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/SNAI1..3_SNAI2.png]] 
|-
|| TLX2 || TLX2 || -0.186753 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/TLX2_TLX2.png]] 
|-
|| TAL1_TCF_3,4,12_ || TCF4 || -0.188978 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/TAL1_TCF_3,4,12__TCF4.png]] 
|-
|| GATA1..3 || GATA1 || -0.193447 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/GATA1..3_GATA1.png]] 
|-
|| GLI1..3 || GLI3 || -0.196351 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/GLI1..3_GLI3.png]] 
|-
|| bHLH_family || ARNTL2 || -0.199272 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/bHLH_family_ARNTL2.png]] 
|-
|| HOX_A5,B5_ || HOXA5 || -0.199518 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/HOX_A5,B5__HOXA5.png]] 
|-
|| IKZF2 || IKZF2 || -0.208705 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/IKZF2_IKZF2.png]] 
|-
|| bHLH_family || CLOCK || -0.214325 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/bHLH_family_CLOCK.png]] 
|-
|| GATA1..3 || GATA2 || -0.215999 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/GATA1..3_GATA2.png]] 
|-
|| PAX3,7 || PAX3 || -0.216099 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/PAX3,7_PAX3.png]] 
|-
|| GCM1,2 || GCM1 || -0.220920 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/GCM1,2_GCM1.png]] 
|-
|| bHLH_family || NPAS2 || -0.242346 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/bHLH_family_NPAS2.png]] 
|-
|| FOS_FOS_B,L1__JUN_B,D_ || JUND || -0.243666 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/FOS_FOS_B,L1__JUN_B,D__JUND.png]] 
|-
|| GLI1..3 || GLI1 || -0.243813 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/GLI1..3_GLI1.png]] 
|-
|| TEF || TEF || -0.251727 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/TEF_TEF.png]] 
|-
|| PBX1 || PBX1 || -0.263422 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/PBX1_PBX1.png]] 
|-
|| RXR_A,B,G___NR1H2,PPAR_dimers || RXRG || -0.284354 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/RXR_A,B,G___NR1H2,PPAR_dimers_RXRG.png]] 
|-
|| ZIC1..3 || ZIC2 || -0.286441 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/ZIC1..3_ZIC2.png]] 
|-
|| MTF1 || MTF1 || -0.288082 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/MTF1_MTF1.png]] 
|-
|| HOX_A6,A7,B6,B7_ || HOXB6 || -0.289895 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/HOX_A6,A7,B6,B7__HOXB6.png]] 
|-
|| ATF5_CREB3 || CREB3 || -0.296706 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/ATF5_CREB3_CREB3.png]] 
|-
|| bHLH_family || TFE3 || -0.298604 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/bHLH_family_TFE3.png]] 
|-
|| ZBTB16 || ZBTB16 || -0.305596 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/ZBTB16_ZBTB16.png]] 
|-
|| RREB1 || RREB1 || -0.308151 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/RREB1_RREB1.png]] 
|-
|| ZNF148 || ZNF148 || -0.324099 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/ZNF148_ZNF148.png]] 
|-
|| bHLH_family || ID1 || -0.326107 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/bHLH_family_ID1.png]] 
|-
|| TOPORS || TOPORS || -0.343149 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/TOPORS_TOPORS.png]] 
|-
|| IKZF1 || IKZF1 || -0.353840 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/IKZF1_IKZF1.png]] 
|-
|| ZEB1 || ZEB1 || -0.356777 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/ZEB1_ZEB1.png]] 
|-
|| PAX1,9 || PAX1 || -0.406964 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/PAX1,9_PAX1.png]] 
|-
|| DMAP1_NCOR_1,2__SMARC || SMARCA1 || -0.413524 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/DMAP1_NCOR_1,2__SMARC_SMARCA1.png]] 
|-
|| HOXA9_MEIS1 || MEIS1 || -0.423077 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/HOXA9_MEIS1_MEIS1.png]] 
|-
|| TAL1_TCF_3,4,12_ || TAL1 || -0.436151 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/TAL1_TCF_3,4,12__TAL1.png]] 
|-
|| HES1 || HES1 || -0.441240 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/HES1_HES1.png]] 
|-
|| TGIF1 || TGIF1 || -0.486870 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/TGIF1_TGIF1.png]] 
|-
|| NFIX || NFIX || -0.607094 || [[https://fantom5-collaboration.gsc.riken.jp/webdav/home/mdehoon/UPDATE_010/motif_activity_expression_scatterplots/NFIX_NFIX.png]] 
|-
|}